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yfiR [2019-09-02 11:36:48]
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yfiR [2019-09-02 11:36:48]

transcriptional regulator (TetR family) of the yfiS-yfiR operon
Locus
BSU_08370
Isoelectric point
5.02
Molecular weight
23.54 kDa
Protein length
205 aa Sequence Blast
Gene length
618 bp Sequence Blast
Function
control of yfiS expression
Product
transcriptional regulator (TetR family)
Essential
no
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Information processing → Regulation of gene expression → Transcription factors and their control → Transcription factor/ other/ based on similarity

    • Gene

    Coordinates
    911,964 912,581

    The protein

    Protein family

  • TetR family

    • Domains

  • HTH tetR-type domain (aa 11-71) (according to UniProt)

    • Structure

  • 1RKT PubMed

    • Expression and Regulation

    Operons

    Genes
    yfiS-yfiR
    Description
    (according to DBTBS) null

    Regulatory mechanism

  • TnrA: activation, PubMed, in TnrA regulon
  • YfiR: repression, [pubmed|], in YfiR regulon
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    Genes
    yfiR
    Description
    PubMed
    view in new tab

    Biological materials

    Mutant

  • MGNA-C356 (yfiR::erm), available at the NBRP B. subtilis, Japan
  • BKE08370 (yfiR::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_GTTTATCCTTGTGCTCCTTT, downstream forward: _UP4_TAAAGAAACGCGGCAGGAGC
  • BKK08370 (yfiR::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_GTTTATCCTTGTGCTCCTTT, downstream forward: _UP4_TAAAGAAACGCGGCAGGAGC

    • References

    Reviews

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    Original publications

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